Characterization of the gut microbiota in patients undergoing fecal microbiota transplantation

Position: Research appointment (pre-doc) Institute: Uni. Bologna
Posted on: 19/06/2026 Deadline: 07/07/2026

Scientific-Disciplinary Group

03/CHEM-07 - Medicinal, Toxicological, Nutraceutical-Food, Fermentation And Health And Wellbeing Products Chemistry

Description

Fecal microbiota transplantation (FMT) is used to treat recurrent Clostridioides difficile infection, and its potential applications in other clinical settings are currently being evaluated. This project aims to characterise the gut microbiota of patients with various disorders undergoing FMT. Longitudinal faecal samples will be analysed using next-generation sequencing techniques, such as 16S rRNA amplicon sequencing and shotgun metagenomics, to achieve high taxonomic and functional resolution. Microbial strains of interest will be isolated using culturomics approaches and subjected to genome sequencing. All data will be integrated with host metadata to assess the role of the microbiota in the clinical response to FMT. Candidates should have a thorough understanding of human gut microbial ecology and solid skills in bioinformatics and biostatistical approaches applied to microbiome research.

Funding body

ALMA MATER STUDIORUM - UNIVERSITA' DI BOLOGNA - - DIPARTIMENTO DI SCIENZE MEDICHE E CHIRURGICHE

How to apply

Other

Selection process

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